NAMD- molecular dynamics

From: Shomesankar Bhunia (
Date: Thu Sep 13 2012 - 14:55:14 CDT

 i am trying to run a ligand protein MD using NAMD. I have used AMBER and
generated the .prmtop and .inpcrd files using xleap in antechamber. Can
anyone please help me out how to set up a MDS with these outputs? Any
tutorial will be helpful. Thanks in advance.

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