From: oguz gurbulak (gurbulakoguz_at_yahoo.com)
Date: Mon Mar 28 2011 - 04:06:05 CDT
I’ve just learned that it’s possible to get a force output file in NAMD
2.8b1. I installed NAMD 2.8b1 and wanted
to get the force output file. I got the net forces on each atom as a DCD
trajectory file. And now I also want to do it using the Tcl output command “output
withforces basename” and get a final PDB file. But I haven’t got enough
information about using Tcl output commands. Could you please help me to learn
this procedure ? How can I do it ?
Thank you very much for your attention.
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