Re: how to submit job on a HPC equipped with infiniband

From: Bjoern Olausson (namdlist_at_googlemail.com)
Date: Mon Jul 26 2010 - 04:31:55 CDT

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On Monday 26 July 2010 09:59:34 liupeng012 wrote:
> Dear Everyone:
>
>
>[...]
>If i run the command "yhrun charmrun namd", then it will informe that
>"Couldn't find rsh program 'rsh'".
>[...]

Obviously RSH is not installed on your cluster. You could have figured out the
following by simply reading "charmm --help":

"++remote-shell which remote shell to use"

Depending on the number of nodes you probably will add "++scalable-start",
too.

Kind regards
Bjoern Olausson

-- 
Bjoern Olausson
Martin-Luther-Universität Halle-Wittenberg 
Fachbereich Biochemie/Biotechnologie
Kurt-Mothes-Str. 3
06120 Halle/Saale
Phone: +49-345-55-24942

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