software/algorithm to cluster protein conformations

From: Basak Isin (isinbasak_at_yahoo.com)
Date: Thu Apr 29 2010 - 17:51:59 CDT

• Next message: Joshua Adelman: "Re: software/algorithm to cluster protein conformations"
• Previous message: neville forlemu: "NAMD2.7/MEtadynamics simulation analysis disparity"
• Next in thread: Joshua Adelman: "Re: software/algorithm to cluster protein conformations"
• Reply: Joshua Adelman: "Re: software/algorithm to cluster protein conformations"
• Reply: Nicholas M Glykos: "Re: software/algorithm to cluster protein conformations"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]

Hello,
I would like to cluster different conformations of a protein focusing on certain residues and their side chains. Is there any available softwares/algorithms that would perform this?
Thanks much.
Basak

• Next message: Joshua Adelman: "Re: software/algorithm to cluster protein conformations"
• Previous message: neville forlemu: "NAMD2.7/MEtadynamics simulation analysis disparity"
• Next in thread: Joshua Adelman: "Re: software/algorithm to cluster protein conformations"
• Reply: Joshua Adelman: "Re: software/algorithm to cluster protein conformations"
• Reply: Nicholas M Glykos: "Re: software/algorithm to cluster protein conformations"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]

This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 15:54:04 CST