Namd benchmark problem

From: Sangamesh B (forum.san_at_gmail.com)
Date: Thu Oct 22 2009 - 10:29:17 CDT

Dear Namd users,

        I've installed NAMD on a Linux HPC cluster by both ways (1)
Downloading binaries (2) By compiling the source with Open MPI.

To test the scaling of Namd, I downloaded the standard benchmark apoa1 from
NAMD website. After doing the benchmark I found that its taking very little
time 3-4 minutes to complete(with 4 cores), but on the website its shown its
taking 4days to complete.

May I know what mistake am doing here?

On the website, there is no info provided about how to do the benchmark.

Thanks

This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 15:53:25 CST