From: Vlad Cojocaru (Vlad.Cojocaru_at_eml-r.villa-bosch.de)
Date: Tue Aug 18 2009 - 05:15:55 CDT
Dear NAMD users,
I am trying to run NAMD on a Blue Gene P . The CVS code from 16th August
was compiled by the people responsible at the supercomputer site.
However when i tried to run it I get an error "glibc detected ...:
corrupted double-linked list: 0xa4657ad8" ....
Now the code was compiled against tcl 8.5 but the details of the
compilation I don't know as I didn't do it myself ...
in my configuration file I have a foreach loop that loks like this one
below..
foreach factor {100 10 1 0.1 0} {
constraintScaling $factor
if { $factor != 0 } {
run 1000
} elseif { $factor == 0 } {
run 5000
}
}
The error comes up after the first call to tcl in the logfile . My guess
is that the error comes from the linking to the tcl libraries but I am
not sure ...
The person at the supercomputer site says its a bug in NAMD ...
Does any of you have an idea what might go wrong here ?
Thanks
Vlad
-- ---------------------------------------------------------------------------- Dr. Vlad Cojocaru EML Research gGmbH Schloss-Wolfsbrunnenweg 33 69118 Heidelberg Tel: ++49-6221-533202 Fax: ++49-6221-533298 e-mail:Vlad.Cojocaru[at]eml-r.villa-bosch.de http://projects.villa-bosch.de/mcm/people/cojocaru/ ---------------------------------------------------------------------------- EML Research gGmbH Amtgericht Mannheim / HRB 337446 Managing Partner: Dr. h.c. Klaus Tschira Scientific and Managing Director: Prof. Dr.-Ing. Andreas Reuter http://www.eml-r.org ----------------------------------------------------------------------------
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