From: Benjamin Bouvier (benjamin.bouvier_at_ibcp.fr)
Date: Thu Jun 18 2009 - 03:50:14 CDT
Prasun,
Such broad questions are textbook stuff, not something you'll see answered
on a mailing list.
I suggest you download and read the first part of the Gromacs manual
(gromacs.org), which is a very good introduction to force fields,
topologies and MD.
On Thu, 18 Jun 2009 06:59:58 +0200, prasun kumar <prasun30_at_gmail.com>
wrote:
> Respected all
>
> can any one please help me in understanding the algorithm NAMD is using
> to
> generate psf file and adding hydrogen(psfgen). I have tried so many
> times,
> but not getting the basic idea.
> Please help me out.
> thanx in advance
> with regards
> PRASUN (ASHOKA)
-- Benjamin
This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 15:52:55 CST