From: Jerome Henin (heninj_at_gmail.com)
Date: Mon Jan 12 2009 - 11:25:43 CST
Hi Marcin,
If you are dealing with few particles, you could also script this in Tcl.
Jerome
On Mon, Jan 12, 2009 at 11:09 AM, Axel Kohlmeyer <akohlmey_at_cmm.upenn.edu> wrote:
> On Mon, 12 Jan 2009, Marcin S. wrote:
>
> MS> Hello,
> MS>
>
> MS> Is there any way to create bonds during a NAMD run? Or, is it
> MS> possible to "glue" two particles together during a run?
>
> how about adding a restraint and cranking up the force
> constant during the run?
>
> cheers,
> axel.
>
> MS>
> MS> Thanks,
> MS> Marcin S.
>
>
>
>
> --
> =======================================================================
> Axel Kohlmeyer akohlmey_at_cmm.chem.upenn.edu http://www.cmm.upenn.edu
> Center for Molecular Modeling -- University of Pennsylvania
> Department of Chemistry, 231 S.34th Street, Philadelphia, PA 19104-6323
> tel: 1-215-898-1582, fax: 1-215-573-6233, office-tel: 1-215-898-5425
> =======================================================================
> If you make something idiot-proof, the universe creates a better idiot.
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