From: Jason Russler (jrussler_at_helix.nih.gov)
Date: Tue Nov 20 2007 - 07:39:58 CST
Hi Brittany, If you didn't get a response, you can find binaries for
your situation on the NAMD website:
http://www.ks.uiuc.edu/Development/Download/download.cgi?PackageName=NAMD
You'll likely want the Linux-amd64-TCP version assuming the cluster's on
gigabit Ethernet.
-Jason
brmorgan_at_clarku.edu wrote:
> Hi,
>
> I've been running NAMD on my local machine, but now I need to install it
> on a cluster. From what I've read, I"ll need to compile it from the source
> code. However, I don't know which options to use or what I'll need to
> change.
>
> Here are the cluster specs:
> 174 node compute farm, each node has dual AMD Opteron 240 processors
> SuSE Linux 9.1 (kernel: 2.4.21-102-defaultx86_64 SMP)
> gcc version 3.3.3
> MPICH 1.2.6 parallel libraries
> PBSpro version 5.4 job scheduling
>
> I'd appreciate any help I can get.
>
> Thanks,
> Brittany
>
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