Re: question about ACE and NME patch

From: JC Gumbart (gumbart_at_ks.uiuc.edu)
Date: Tue Sep 04 2007 - 10:38:17 CDT

Normally you would do it when building the segment like this:

segment A {
xxx.pdb
first ACE
last NME
}

However, I cannot find an NME patch anywhere in the charmm topology.
Are you sure that's what you want? What is the error that you are
getting?

On Sep 4, 2007, at 10:10 AM, Xiang Mao wrote:

> Hello, everyone:
> I am trying to patch ACE to N-term and NME to C-term of my
> peptide, I have tried all the ways that I could find(suggestion
> from NAMD-L and tutorial), but still no success. I am just
> wondering if there is a way to do it.Thanks.
>
>
> Best,
> Mao

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