| A12_f | ComputeNonbondedUtil | privatestatic |
| A6_f | ComputeNonbondedUtil | privatestatic |
| accelMDOn | ComputeNonbondedUtil | privatestatic |
| alchDecouple | ComputeNonbondedUtil | privatestatic |
| alchFepOn | ComputeNonbondedUtil | privatestatic |
| alchThermIntOn | ComputeNonbondedUtil | privatestatic |
| alchVdwShiftCoeff | ComputeNonbondedUtil | privatestatic |
| alchWCAOn | ComputeNonbondedUtil | privatestatic |
| atomUpdate() | ComputePatchPair | virtual |
| avgPositionBox | ComputeNonbondedPair | protected |
| B12_f | ComputeNonbondedUtil | privatestatic |
| B6_f | ComputeNonbondedUtil | privatestatic |
| basePriority | Compute | protected |
| bornRadBox | ComputeNonbondedPair | protected |
| c0 | ComputeNonbondedUtil | privatestatic |
| c1 | ComputeNonbondedUtil | privatestatic |
| C12_f | ComputeNonbondedUtil | privatestatic |
| c3 | ComputeNonbondedUtil | privatestatic |
| c5 | ComputeNonbondedUtil | privatestatic |
| c6 | ComputeNonbondedUtil | privatestatic |
| C6_f | ComputeNonbondedUtil | privatestatic |
| c7 | ComputeNonbondedUtil | privatestatic |
| c8 | ComputeNonbondedUtil | privatestatic |
| calc_error(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_fep(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_fullelect(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_fullelect_fep(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_fullelect_go(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_fullelect_int(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_fullelect_les(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_fullelect_pprof(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_fullelect_tabener(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_fullelect_ti(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_go(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_int(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_les(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_merge_fullelect(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_merge_fullelect_fep(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_merge_fullelect_go(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_merge_fullelect_int(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_merge_fullelect_les(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_merge_fullelect_pprof(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_merge_fullelect_tabener(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_merge_fullelect_ti(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_pprof(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_slow_fullelect(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_slow_fullelect_fep(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_slow_fullelect_go(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_slow_fullelect_les(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_slow_fullelect_pprof(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_slow_fullelect_tabener(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_slow_fullelect_ti(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_tabener(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_energy_ti(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_fullelect(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_fullelect_go(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_fullelect_les(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_fullelect_pprof(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_fullelect_tabener(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_fullelect_ti(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_go(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_les(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_merge_fullelect(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_merge_fullelect_go(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_merge_fullelect_les(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_merge_fullelect_pprof(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_merge_fullelect_tabener(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_merge_fullelect_ti(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_pprof(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_slow_fullelect(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_slow_fullelect_go(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_slow_fullelect_les(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_slow_fullelect_pprof(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_slow_fullelect_tabener(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_slow_fullelect_ti(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_tabener(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_pair_ti(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_fep(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_fullelect(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_fullelect_fep(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_fullelect_go(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_fullelect_int(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_fullelect_les(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_fullelect_pprof(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_fullelect_tabener(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_fullelect_ti(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_go(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_int(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_les(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_merge_fullelect(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_merge_fullelect_fep(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_merge_fullelect_go(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_merge_fullelect_int(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_merge_fullelect_les(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_merge_fullelect_pprof(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_merge_fullelect_tabener(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_merge_fullelect_ti(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_pprof(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_slow_fullelect(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_slow_fullelect_fep(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_slow_fullelect_go(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_slow_fullelect_les(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_slow_fullelect_pprof(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_slow_fullelect_tabener(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_slow_fullelect_ti(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_tabener(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_energy_ti(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_fullelect(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_fullelect_go(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_fullelect_les(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_fullelect_pprof(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_fullelect_tabener(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_fullelect_ti(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_go(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_les(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_merge_fullelect(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_merge_fullelect_go(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_merge_fullelect_les(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_merge_fullelect_pprof(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_merge_fullelect_tabener(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_merge_fullelect_ti(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_pprof(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_slow_fullelect(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_slow_fullelect_go(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_slow_fullelect_les(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_slow_fullelect_pprof(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_slow_fullelect_tabener(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_slow_fullelect_ti(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_tabener(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calc_self_ti(nonbonded *) | ComputeNonbondedUtil | privatestatic |
| calcFullPair | ComputeNonbondedUtil | privatestatic |
| calcFullPairEnergy | ComputeNonbondedUtil | privatestatic |
| calcFullSelf | ComputeNonbondedUtil | privatestatic |
| calcFullSelfEnergy | ComputeNonbondedUtil | privatestatic |
| calcGBIS(nonbonded *params, GBISParamStruct *gbisParams) | ComputeNonbondedUtil | private |
| calcMergePair | ComputeNonbondedUtil | privatestatic |
| calcMergePairEnergy | ComputeNonbondedUtil | privatestatic |
| calcMergeSelf | ComputeNonbondedUtil | privatestatic |
| calcMergeSelfEnergy | ComputeNonbondedUtil | privatestatic |
| calcPair | ComputeNonbondedUtil | privatestatic |
| calcPairEnergy | ComputeNonbondedUtil | privatestatic |
| calcSelf | ComputeNonbondedUtil | privatestatic |
| calcSelfEnergy | ComputeNonbondedUtil | privatestatic |
| calcSlowPair | ComputeNonbondedUtil | privatestatic |
| calcSlowPairEnergy | ComputeNonbondedUtil | privatestatic |
| calcSlowSelf | ComputeNonbondedUtil | privatestatic |
| calcSlowSelfEnergy | ComputeNonbondedUtil | privatestatic |
| cid | Compute | |
| columnsize | ComputeNonbondedUtil | privatestatic |
| commOnly | ComputeNonbondedUtil | privatestatic |
| Compute(ComputeID) | Compute | |
| ComputeNonbondedPair(ComputeID c, PatchID pid[], int trans[], ComputeNonbondedWorkArrays *_workArrays, int minPartition=0, int maxPartition=1, int numPartitions=1) | ComputeNonbondedPair | |
| ComputeNonbondedUtil() | ComputeNonbondedUtil | inlineprivate |
| ComputePatchPair(ComputeID c, PatchID pid[], int t[]) | ComputePatchPair | |
| computeType | Compute | protected |
| corr_table | ComputeNonbondedUtil | privatestatic |
| cutoff | ComputeNonbondedUtil | privatestatic |
| cutoff2 | ComputeNonbondedUtil | privatestatic |
| cutoff2_f | ComputeNonbondedUtil | privatestatic |
| cutoff_3 | ComputeNonbondedUtil | privatestatic |
| cutoff_3_f | ComputeNonbondedUtil | privatestatic |
| cutoff_6 | ComputeNonbondedUtil | privatestatic |
| cutoff_6_f | ComputeNonbondedUtil | privatestatic |
| dEdaSumBox | ComputeNonbondedPair | protected |
| dHdrPrefixBox | ComputeNonbondedPair | protected |
| dielectric_1 | ComputeNonbondedUtil | privatestatic |
| doForce(CompAtom *p[2], CompAtomExt *pExt[2], Results *r[2]) | ComputeNonbondedPair | protectedvirtual |
| doWork() | ComputePatchPair | virtual |
| drudeNbthole | ComputeNonbondedUtil | privatestatic |
| electEnergyIndex enum value | ComputeNonbondedUtil | private |
| electEnergyIndex_s enum value | ComputeNonbondedUtil | private |
| electEnergyIndex_ti_1 enum value | ComputeNonbondedUtil | private |
| electEnergyIndex_ti_2 enum value | ComputeNonbondedUtil | private |
| enqueueWork() | Compute | protected |
| ewaldcof | ComputeNonbondedUtil | privatestatic |
| exclChecksumIndex enum value | ComputeNonbondedUtil | private |
| fast_table | ComputeNonbondedUtil | privatestatic |
| finishPatch(int) | Compute | virtual |
| fixedAtomsOn | ComputeNonbondedUtil | privatestatic |
| forceBox | ComputePatchPair | protected |
| full_table | ComputeNonbondedUtil | privatestatic |
| fullElectEnergyIndex enum value | ComputeNonbondedUtil | private |
| fullElectEnergyIndex_s enum value | ComputeNonbondedUtil | private |
| fullElectEnergyIndex_ti_1 enum value | ComputeNonbondedUtil | private |
| fullElectEnergyIndex_ti_2 enum value | ComputeNonbondedUtil | private |
| gbisP2PatchReady(PatchID, int seq) | Compute | virtual |
| gbisP3PatchReady(PatchID, int seq) | Compute | virtual |
| gbisParams | ComputeNonbondedPair | |
| gbisPhase | Compute | protected |
| gbisPhasePriority | Compute | protected |
| gbisStepPairlists | ComputeNonbondedPair | protected |
| getGBISPhase(void) | Compute | inline |
| getNumPatches() | Compute | inline |
| goForcesOn | ComputeNonbondedUtil | privatestatic |
| goGroPair | ComputeNonbondedUtil | privatestatic |
| goMethod | ComputeNonbondedUtil | privatestatic |
| goNativeEnergyIndex enum value | ComputeNonbondedUtil | private |
| goNonnativeEnergyIndex enum value | ComputeNonbondedUtil | private |
| groGaussEnergyIndex enum value | ComputeNonbondedUtil | private |
| groLJEnergyIndex enum value | ComputeNonbondedUtil | private |
| initialize() | ComputeNonbondedPair | protectedvirtual |
| intRad | ComputeNonbondedPair | protected |
| intRadBox | ComputeNonbondedPair | protected |
| k_vdwa | ComputeNonbondedUtil | privatestatic |
| k_vdwa_f | ComputeNonbondedUtil | privatestatic |
| k_vdwb | ComputeNonbondedUtil | privatestatic |
| k_vdwb_f | ComputeNonbondedUtil | privatestatic |
| lambda_table | ComputeNonbondedUtil | privatestatic |
| ldObjHandle | Compute | |
| lesFactor | ComputeNonbondedUtil | privatestatic |
| lesOn | ComputeNonbondedUtil | privatestatic |
| lesScaling | ComputeNonbondedUtil | privatestatic |
| ljTable | ComputeNonbondedUtil | privatestatic |
| localWorkMsg | Compute | |
| maxPart | ComputeNonbondedPair | protected |
| minPart | ComputeNonbondedPair | protected |
| mol | ComputeNonbondedUtil | privatestatic |
| noWork() | ComputeNonbondedPair | protectedvirtual |
| numAtoms | ComputePatchPair | protected |
| numGBISPairlists | ComputeNonbondedPair | protectedstatic |
| numParts | ComputeNonbondedPair | protected |
| p | ComputePatchPair | protected |
| pairInteractionOn | ComputeNonbondedUtil | privatestatic |
| pairInteractionSelf | ComputeNonbondedUtil | privatestatic |
| pairlists | ComputeNonbondedPair | protected |
| pairlistsValid | ComputeNonbondedPair | protected |
| pairlistTolerance | ComputeNonbondedPair | protected |
| pairlistWarningIndex enum value | ComputeNonbondedUtil | private |
| params | ComputeNonbondedPair | |
| patch | ComputePatchPair | protected |
| patchID | ComputePatchPair | protected |
| patchReady(PatchID, int doneMigration, int seq) | Compute | virtual |
| pExt | ComputePatchPair | protected |
| pi_ewaldcof | ComputeNonbondedUtil | privatestatic |
| positionBox | ComputePatchPair | protected |
| pressureProfileAtomTypes | ComputeNonbondedUtil | privatestatic |
| pressureProfileData | ComputeNonbondedPair | protected |
| pressureProfileMin | ComputeNonbondedUtil | privatestatic |
| pressureProfileOn | ComputeNonbondedUtil | privatestatic |
| pressureProfileReduction | ComputeNonbondedPair | protected |
| pressureProfileSlabs | ComputeNonbondedUtil | privatestatic |
| pressureProfileThickness | ComputeNonbondedUtil | privatestatic |
| priority(void) | Compute | inline |
| psiSumBox | ComputeNonbondedPair | protected |
| qmForcesOn | ComputeNonbondedUtil | privatestatic |
| r | ComputePatchPair | protected |
| r2_delta | ComputeNonbondedUtil | privatestatic |
| r2_delta_1 | ComputeNonbondedUtil | privatestatic |
| r2_delta_exp | ComputeNonbondedUtil | privatestatic |
| r2_table | ComputeNonbondedUtil | privatestatic |
| reduction | ComputeNonbondedPair | protected |
| reductionData | ComputeNonbondedPair | protected |
| reductionDataSize enum value | ComputeNonbondedUtil | private |
| rowsize | ComputeNonbondedUtil | privatestatic |
| scale14 | ComputeNonbondedUtil | privatestatic |
| scaling | ComputeNonbondedUtil | privatestatic |
| scor_table | ComputeNonbondedUtil | privatestatic |
| select(void) | ComputeNonbondedUtil | privatestatic |
| sequence(void) | Compute | inline |
| setNumPatches(int n) | Compute | inline |
| slow_table | ComputeNonbondedUtil | privatestatic |
| square(const BigReal &x, const BigReal &y, const BigReal &z) | ComputeNonbondedUtil | inlineprivatestatic |
| submitPressureProfileData(BigReal *, SubmitReduction *) | ComputeNonbondedUtil | privatestatic |
| submitReductionData(BigReal *, SubmitReduction *) | ComputeNonbondedUtil | privatestatic |
| switchOn | ComputeNonbondedUtil | privatestatic |
| switchOn2 | ComputeNonbondedUtil | privatestatic |
| switchOn_1 | ComputeNonbondedUtil | privatestatic |
| switchOn_f | ComputeNonbondedUtil | privatestatic |
| table_alloc | ComputeNonbondedUtil | privatestatic |
| table_ener | ComputeNonbondedUtil | privatestatic |
| table_length | ComputeNonbondedUtil | privatestatic |
| table_noshort | ComputeNonbondedUtil | privatestatic |
| table_short | ComputeNonbondedUtil | privatestatic |
| TENSOR enum value | ComputeNonbondedUtil | private |
| trans | ComputePatchPair | protected |
| type() | Compute | inline |
| v_vdwa | ComputeNonbondedUtil | privatestatic |
| v_vdwa_f | ComputeNonbondedUtil | privatestatic |
| v_vdwb | ComputeNonbondedUtil | privatestatic |
| v_vdwb_f | ComputeNonbondedUtil | privatestatic |
| vdw_switch_mode | ComputeNonbondedUtil | privatestatic |
| vdwa_table | ComputeNonbondedUtil | privatestatic |
| vdwb_table | ComputeNonbondedUtil | privatestatic |
| vdwEnergyIndex enum value | ComputeNonbondedUtil | private |
| vdwEnergyIndex_s enum value | ComputeNonbondedUtil | private |
| vdwEnergyIndex_ti_1 enum value | ComputeNonbondedUtil | private |
| vdwEnergyIndex_ti_2 enum value | ComputeNonbondedUtil | private |
| vdwForceSwitching | ComputeNonbondedUtil | privatestatic |
| VECTOR enum value | ComputeNonbondedUtil | private |
| velocityBox | ComputeNonbondedPair | protected |
| workArrays | ComputeNonbondedPair | protected |
| ~Compute() | Compute | virtual |
| ~ComputeNonbondedPair() | ComputeNonbondedPair | |
| ~ComputeNonbondedUtil() | ComputeNonbondedUtil | inlineprivate |
| ~ComputePatchPair() | ComputePatchPair | virtual |
