 
 
 
 
 
 
 
 
 
 
 Next: HBonds
 Up: Rendering methods
 Previous: Bonds
     Contents 
     Index 
DynamicBonds
The `DynamicBonds' representation will automatically perform a
distanced-based bond search for the active atom selection and active
trajectory frame.  This representation does not perform the endpoint fixup
procedure described above for the regular `Bonds' representation.  Instead, it is
intended to be used in concert with the `VDW' representation to show bonds that are
being created and destroyed during the course of a trajectory.  A bond is
drawn if the atoms are within Distance Cutoff of eachother. 
vmd@ks.uiuc.edu