highlight bases 1.1
-------------------

REQUIREMENTS: VMD Version 1.8 or greater

DESCRIPTION:
	highlight_bases emphasizes nucleic acid bases in DNA.
	It draws tiny squares for each base, with the squares
	color-coded by base type.  Warning:  This procedure
	does not work for all bases (i.e. due to atom-naming
	conventions)

PROCEDURES:
	highlight_bases -  pass the molecule id to it in order
	to draw tiny squares corresponding to each base

EXAMPLE USAGE
	highlight_bases top    (draws squares for bases of top
	molecule)

EXAMPLE OUTPUT
	A lines representation of DNA,
	with bases highlighted using highlight_bases



DOWNLOAD THE FILE:
	highlight_bases.tcl


AUTHOR:
	Andrew Dalke (dalke@ks.uiuc.edu)