The sequence viewer is used to list the residue sequences of proteins and the base sequences of nucleic acids, and to select residues/bases from the sequence list for highlighting in the 3-D structure in the main VMD window. When residues are selected in the main VMD window, the corresponding residue is highlighted in the sequence list in this form. Color-coded protein structure information is displayed for amino-acid residues, and B-factor information is displayed for all residues. In this section, ``residues'' refers both to amino acid residues in proteins, and to nucleotide bases with associated backbone in DNA and RNA molecules. Image of the Sequence Viewer Plugin