FATAL ERROR: DIDN'T FIND vdW PARAMETER FOR ATOM TYPE N238

From: 辛志宏 (xzhfood_at_njau.edu.cn)
Date: Fri Nov 12 2021 - 08:35:40 CST

Hello!
An error occured when I run a molecular dynamic using NAMD3,

FATAL ERROR: DIDN'T FIND vdW PARAMETER FOR ATOM TYPE N238

I don't know how to solve it, any suggestion will be much appreciate.

The following parameters were used,
parameters ./common/par_all36_prot.prm
parameters ./common/par_all36_carb.prm
parameters ./common/par_all36_cgenff.prm
parameters ./common/par_all36_lipid.prm
parameters ./common/par_all36_na.prm
parameters ./common/UNK_DEF6D6.prm
parameters ./common/toppar_water_ions_namd.str
#parameters ./common/toppar_water_ions.mod.str (don't works)

Thanks,

Zhihong xin



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