From: Monika Madhavi (monikamadhavi_at_gmail.com)
Date: Fri Jul 12 2019 - 08:36:21 CDT
Dear Norman and NAMD support team,
When I try to run NAMD in a cluster, I came across the following error
which you addressed in the following link.
"mpiexec: /etc/sgi-release: unexpected contents
Charmrun> error attaching to node '127.0.0.1':
Timeout waiting for node-program to connect"
https://www.ks.uiuc.edu/Research/namd/mailing_list/namd-l.2012-2013/2645.html
So I included the command, "module load openmpi" in my shell script and now
I am getting this error message and the simulation job is suspended after
sometime.
"Assertion "0" failed in file machine-ibverbs.c line 1522."
Can you please suggest what could be the possible reason for this error?
Thank you.
Best regards,
Monika
-- W.A.Monika Madhavi Lecturer (Probation), Department of Physics, University of Colombo. <https://www.avast.com/sig-email?utm_medium=email&utm_source=link&utm_campaign=sig-email&utm_content=webmail&utm_term=icon> Virus-free. www.avast.com <https://www.avast.com/sig-email?utm_medium=email&utm_source=link&utm_campaign=sig-email&utm_content=webmail&utm_term=link> <#DAB4FAD8-2DD7-40BB-A1B8-4E2AA1F9FDF2>
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