Three bonds with water in vmd from NAMD DCD

From: Seibold, Steve Allan (
Date: Tue Aug 21 2018 - 09:17:43 CDT


I know this has been addressed and that the psf file contains the extra bonds between hydrogens in water, but I don't know how to remove the bond from the psf file...I also saw an email where a "script" was mentioned to remove these bonds but I could not find that script on-line..Could someone send me that script? I would greatly appreciate it...

Thanks, Steve

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