NAMD energy run in VMD

From: Srijita Paul (
Date: Tue Nov 21 2017 - 09:43:08 CST

I have some doubts in namd energy calculation from vmd.
1.If I want to calculate intermolecular interaction energy between same
molecule what will be the sel1 and sel2 selection. Because same name in
sel1 and sel2 does not work.
2.For generating xsc file what will be the input in x-length and centre .Is
it final box length and half box length of the system respectively?

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