From: Hyun (biophysics1_at_gmail.com)
Date: Fri Jun 23 2017 - 11:43:38 CDT
Dear NAMD users
I am trying to find the CHARMM topology file for an oxidized cysteine. (
ex. the residue CSO in 1oet.pdb )
Is there any patch or the CHARMM topology file for an oxidized cysteine ?
Also, could you explain how to generate the topology file for an oxidized
cysteine (Cys—SOH) if there is no available topology for it ?
Recommending tutorials or summary of method will be helpful.
I don't have an experience for building the topology file, but if I will
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