**From:** Hyun (*biophysics1_at_gmail.com*)

**Date:** Fri Jun 23 2017 - 11:43:38 CDT

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Dear NAMD users

I am trying to find the CHARMM topology file for an oxidized cysteine. (

ex. the residue CSO in 1oet.pdb )

Is there any patch or the CHARMM topology file for an oxidized cysteine ?

Also, could you explain how to generate the topology file for an oxidized

cysteine (Cys—SOH) if there is no available topology for it ?

Recommending tutorials or summary of method will be helpful.

I don't have an experience for building the topology file, but if I will

try.

Thanks

Hyun

**Next message:**Francesco Pietra: "Re: measuring Euler angles and polar angles"**Previous message:**Jérôme Hénin: "Re: measuring Euler angles and polar angles"**Next in thread:**Radak, Brian K: "Re: topology file for the residue CSO"**Reply:**Radak, Brian K: "Re: topology file for the residue CSO"**Messages sorted by:**[ date ] [ thread ] [ subject ] [ author ] [ attachment ]

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