From: divyabharathi korlepara (divyabharathik938_at_gmail.com)
Date: Fri Jun 09 2017 - 02:58:16 CDT
Hi NAMD users,
I am new to NAMD. I have to run a simulation for a
system
having cyclohexane and benzene.
I have generated psf files using charmm carbohydrate
topology for cyclodextrin and cgenff for benzene.
1) As mentioned in the given link we can use to more than one
parameter file
http://www.ks.uiuc.edu/Research/namd/mailing_list/namd-l.2014-2015/2449.html
2) While running the simulation i have mentioned two
parameter files using keyword 'parameters' then the simulation terminating
by giving the
error FATAL ERROR: DIDN'T FIND vdW PARAMETER FOR ATOM TYPE O
Awaiting for your response.
Thanks,
Divya.
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