From: Rabeta Yeasmin (rabetayeasmin_at_gmail.com)
Date: Fri Jun 16 2017 - 16:21:55 CDT
Hi,
I am trying to run umbrella sampling of a protein-lipid system. I have put
protein at different height in z direction from the lipid in different
windows. In each windows, I want the protein to move in a way that the
distance of the centre of mass of lipid and protein vary in a range of 2A
above and below of the current position of the protein. I am not sure which
parameter will allow me to do that. I have tried using width and setting
lower and upper boundary. But it did not work.
Can anyone please help me?
Thanks.
Regrads
Rabeta Yeasmin
This archive was generated by hypermail 2.1.6 : Sun Dec 31 2017 - 23:21:23 CST