Re: Regarding Trajectory files

From: Harish Srinivasan (
Date: Mon Dec 26 2016 - 23:44:03 CST


Did you try to find the endianness (little and big) of the DCD file. Use
flipdcd program (available in the NAMD exectuable folder) to check this.
The same program will also help you in changing from big to little and vice


On 26 December 2016 at 10:48, Amit Kumar <> wrote:

> Hi,
> I am using NAMD in two different machines. I am not able to analyze
> Trajectory files (dcd) generated by one machine while Trajectory files
> generated by other machine are working fine. So, what can be the problem ?
> Note: Using same software (NMAD), same script, only machines are different.
> Thank you very much.
> Amit Kumar

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