Using Mergestructs

From: Eric Weine (ericweine_at_uchicago.edu)
Date: Tue May 31 2016 - 14:09:46 CDT

Hi all,

I'm trying to use CHARMM36 parameters with the merge structures plugin in
VMD. The default parameters are CHARMM27. Does anyone know how to do this?
I found that the mergestructures.tcl script gets the parameters for psfgen
under the comment "# this is a hack, just to get the topology file."
However, I was unable to edit this such that I could use the CHARMM36
parameters.

Any help is appreciated,

Eric Weine.

University of Chicago Biological Sciences Division.

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