(no subject)

From: Srijita Paul (srijitap91_at_gmail.com)
Date: Tue Dec 22 2015 - 00:06:49 CST

hii..i am a novice in namd...i am working on the molecule
choline-o-sulfate.when i am going to creat the psf file from automatic psf
builder it is giving the warning 'select atleast one atom'...but when i am
writting the tcl script 'set choline-o-sulfate [atomselect top protein]' on
vmd-tk console it is showing the result atomselect0 or saying 'invalide
command name choline'..plz suggest me how can i generatre the psf file for
this molecule...the pdb file is attached here.

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