Re: node file for NAMD

From: Abhishek Tyagi (atyagiaa_at_connect.ust.hk)
Date: Fri Sep 11 2015 - 22:55:16 CDT

Dear Parag,

Have you gone through the mailing list, you may find similar questions asked previously. For multiple node for example cluster, your job examples were given in namd readme file. Just follow the instructions.

> On 11 Sep, 2015, at 9:02 pm, Parag Khuraswar <parag_k_at_citilindia.com> wrote:
>
> Hi,
>
>
> Can anyone help to run 1 job of MAND on multiple node. How to create a node file and command line syntax in PBS job script for NAMD.
>
> Regards,
> Parag
> +91 8308806004
>
> From: Parag Khuraswar
> Sent: Wednesday, September , 2015 9:58 AM
> To: namd-l_at_ks.uiuc.edu <mailto:namd-l_at_ks.uiuc.edu>
> Cc: 'Peter Freddolino'
> Subject: node file for NAMD
>
> Hi,
>
> Can anyone help me to know how to create PBS node file to run one NAMD job on multiple node. And also command line syntax in PBS job script for NAMD.
>
> Regards,
> Parag
> +91 8308806004

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