From: Norman Geist (norman.geist_at_uni-greifswald.de)
Date: Mon Jun 01 2015 - 02:43:36 CDT
You need at least 2*#replicas processes. Please also tell us what "would not
start" actually means?
Norman Geist.
From: owner-namd-l_at_ks.uiuc.edu [mailto:owner-namd-l_at_ks.uiuc.edu] On Behalf
Of Avisek Das
Sent: Friday, May 29, 2015 9:43 PM
To: namd-l_at_ks.uiuc.edu
Subject: namd-l: Using the multi-copy version of NAMD on a linux workstation
Hi,
I am interested in using the multi-copy algorithms in NAMD on my Linux
workstation. It is a standard Dell Precision workstation with 8 cores. I
want to do this for debugging some codes.
I downloaded the installation listed under "Linux-x86_64-netlrts
<http://www.ks.uiuc.edu/Development/Download/download.cgi?UserID=&AccessCode
=&ArchiveID=1320> (Multi-copy algorithms)" and tried to run it with the
following command.
charmrun +p4 ++local ./namd2 +replicas 16 initial.conf +stdout
output/%02d/job00.%04d.log
The program would not start. My questions are:
1. Is this the right version of NAMD for using the multiple copy algorithms?
2. If yes, what is the correct way to launch the executable.
Thanks,
Avisek
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