From: Christian Bope Domilongo (christianbope_at_aims.ac.za)
Date: Fri Jan 09 2015 - 09:18:32 CST
Thank you for your reply. I have read the tutorial, I did not find the
output information on the CG of residue to form a bead. For example like
CG1(1-12), CG2(13-45), etc. The output provide only the CG beads
information (CG1,CG2,etc) without giving the mapping sequences.
Thank
On 9 January 2015 at 22:23, Jeff Comer <jeffcomer_at_gmail.com> wrote:
> Forgive me if you're already aware of this tutorial, but perhaps the
> shape-based coarse-graining tutorial has the answers to your
> questions:
>
> http://www.ks.uiuc.edu/Training/Tutorials/
>
> Jeff
>
> –––––––––––––––––––––––––––––––––––———————
> Jeffrey Comer, PhD
> Assistant Professor
> Institute of Computational Comparative Medicine
> Nanotechnology Innovation Center of Kansas State
> Kansas State University
> Office: P-213 Mosier Hall
> Phone: 785-532-6311
>
>
> On Fri, Jan 9, 2015 at 4:31 AM, Christian Bope Domilongo
> <christianbope_at_aims.ac.za> wrote:
> > How to get the mapping sequences in Shape Based CG Model using Coarse
> > Grain Builder in VMD?
> >
> > In order word, I want to get residues range mapping used to CG my system
> in
> > n beads (like 1bead = residue x - residue y, ...).
> >
> > Thank you
>
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