From: Vlad Cojocaru (vlad.cojocaru_at_mpi-muenster.mpg.de)
Date: Mon Nov 17 2014 - 09:57:37 CST
But this looks more like an average distance than a minimum distance,
isn't it ?
On 11/17/2014 03:49 PM, Giacomo Fiorin wrote:
>
> Can you try distanceInv choosing the exponent that gives you the best
> behavior?
>
> On Nov 17, 2014 8:42 AM, "Vlad Cojocaru"
> <vlad.cojocaru_at_mpi-muenster.mpg.de
> <mailto:vlad.cojocaru_at_mpi-muenster.mpg.de>> wrote:
>
> Dear NAMD users,
>
> Could you please let me know if it is currently possible to define
> the minimal distance between 2 groups of atoms as a colvar
> component within the colvar module ?
>
> Thanks
>
> Best wishes
> Vlad
>
> --
> Dr. Vlad Cojocaru
> Computational Structural Biology Laboratory
> Department of Cell and Developmental Biology
> Max Planck Institute for Molecular Biomedicine
> Röntgenstrasse 20, 48149 Münster, Germany
> Tel: +49-251-70365-324 <tel:%2B49-251-70365-324>; Fax:
> +49-251-70365-399 <tel:%2B49-251-70365-399>
> Email: vlad.cojocaru[at]mpi-muenster.mpg.de
> <http://mpi-muenster.mpg.de>
> http://www.mpi-muenster.mpg.de/research/teams/groups/rgcojocaru
>
-- Dr. Vlad Cojocaru Computational Structural Biology Laboratory Department of Cell and Developmental Biology Max Planck Institute for Molecular Biomedicine Röntgenstrasse 20, 48149 Münster, Germany Tel: +49-251-70365-324; Fax: +49-251-70365-399 Email: vlad.cojocaru[at]mpi-muenster.mpg.de http://www.mpi-muenster.mpg.de/research/teams/groups/rgcojocaru
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