Re: Mechanical Properties of protein

From: Maxim Belkin (mbelkin_at_ks.uiuc.edu)
Date: Thu Oct 30 2014 - 20:27:58 CDT

Hi Chinchun,

If you could give more specifics about your problem, then we could take care of it. So, what is wrong with the results you get when you follow the tutorial?

Maxim

> On Oct 30, 2014, at 19:18, chin chun <chinchun19_at_gmail.com> wrote:
>
> Hi,
>
> I am trying to calculate mechanical properties of a protein using the similar approach as used in document posted here: http://bionano.physics.illinois.edu/sites/default/files/Stretching_dsDNA.pdf <http://bionano.physics.illinois.edu/sites/default/files/Stretching_dsDNA.pdf>
> I found tutorial of this method here: http://bionano.physics.illinois.edu/tutorials/visualizing-md-results-stretching-dsdna-mini-tutorial <http://bionano.physics.illinois.edu/tutorials/visualizing-md-results-stretching-dsdna-mini-tutorial>
> However, when I tried to follow the method and made configuration file I could not get similar results as mentioned in the tutorial.
> I was wondering if somebody have the configuration file of this tutorial that I can compare with mine and correct the problem.
>
> Thank you
>
> Chinchun

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