explicit membrane in implicit solvent

From: Gisella Alfonsino (gisella.alfonsino_at_gmail.com)
Date: Mon Nov 03 2014 - 05:00:36 CST

Dear Madam/Sir,
I am trying to run a simulation with a protein anchored to the membrane in
implicit solvent. In the configuration file I introduce GBIS parameteres:

# GBIS parameters
ionConcentration 0.3
alphaCutoff 12

I tried to run the simulation with and without PBC.
The system is not stable. The bilayer seems to disaggregate with lipids
moving away from it.
I tried to search in internet a solution but I did'nt find a solution.
Can you help me?

This archive was generated by hypermail 2.1.6 : Wed Dec 31 2014 - 23:22:57 CST