From: Axel Kohlmeyer (akohlmey_at_gmail.com)
Date: Mon Feb 24 2014 - 04:34:22 CST
On Feb 24, 2014 4:37 AM, "sunyeping" <sunyeping_at_aliyun.com> wrote:
>
>
>
> Yeping Sun
>
> Institute of Microbiology, Chinese Academy of Sciences
>
>
> ------------------------------------------------------------------
> 发件人：Axel Kohlmeyer <akohlmey_at_gmail.com>
> 发送时间：2014年2月24日(星期一) 11:26
>
> 收件人：孙业平 <sunyeping_at_aliyun.com>
> 抄 送：namd-l <namd-l_at_ks.uiuc.edu>
> 主 题：Re: RE：namd-l: NAMDEnergy: FATAL ERROR: Please add +idlepoll to
command line for proper performance
>
> On Sun, Feb 23, 2014 at 10:13 PM, sunyeping <sunyeping_at_aliyun.com> wrote:
> >
> > 发件人：Axel Kohlmeyer <akohlmey_at_gmail.com>
> > 发送时间：2014年2月24日(星期一) 10:57
> > 收件人：孙业平 <sunyeping_at_aliyun.com>
> > 抄 送：namd-l <namd-l_at_ks.uiuc.edu>
> > 主 题：Re: namd-l: NAMDEnergy: FATAL ERROR: Please add +idlepoll to command
> > line for proper performance
> >
> > On Sun, Feb 23, 2014 at 9:29 PM, sunyeping <sunyeping_at_aliyun.com> wrote:
> >> Dear NAMD user,
> >>
> >> I am using CUDA accelerated VMD and trying to run NAMD Energy using
NAMD
> >> Energy Plugin graphical interface. I am getting this error:
> >> FATAL ERROR: Please add +idlepoll to command line for proper
> >> performance.
> >>
> >> In namd mail list here Dr. Axel Kohlmeyer used to give comment to the
> >> error.
> >> He suggest changing the namdenergy.tcl script and insert it everywhere
> >> namd
> >> is executed, But I cann't understand it. Should I put the vmd scrpit
> >> namdenergy.tcl into the directory which contains namd2 command? I have
> >> tried
> >> it but it doesn't work?
> >
> > of *course* it doesn't work. you have to put the modified version
> > where you took the original version from. or is that too obvious?
> >
> > axel.
> >
> >
> >>Hi, axel,
> >
> > I would be very appreciated if you could explain how to modify the
> > namdenergy.tcl script.
>
> you load it into a text editor, change the text and save it. done.
>
> axel.
>
> >Sorry but I mean I don't know where should I insert "+idlepoll" in the
namdenergy.tcl script.
Where it calls NAMD, of course.
>
> Best regards.
>
> >> Yeping Sun
> >
> >>
> >>
> >>
> >
> >
> >
> > --
> > Dr. Axel Kohlmeyer akohlmey_at_gmail.com http://goo.gl/1wk0
> > College of Science & Technology, Temple University, Philadelphia PA, USA
> > International Centre for Theoretical Physics, Trieste. Italy.
>
>
>
> --
> Dr. Axel Kohlmeyer akohlmey_at_gmail.com http://goo.gl/1wk0
> College of Science & Technology, Temple University, Philadelphia PA, USA
> International Centre for Theoretical Physics, Trieste. Italy.
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