Error when running MIC version of namd on Stampede

From: Chen Wei (
Date: Fri Feb 21 2014 - 09:49:38 CST


I used the runbatch script provided by the Schulten's group:
/home1/00288/tg455591/NAMD_scripts/runbatch_latest_mic to run a simulation
on Stampede of TACC. The simulation ran for about 12 hours, then crashed.
It gave an error:"Charmrun: error on request socket-- Socket closed before
recv.". I repeated the simulation twice. All crashed after ~12 hours and
gave the same error. Have anyone met the same problem? What could be wrong?

Thank you.

Wei Chen

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