Re: AW: moving out of the box

From: Ariel Talavera Perez (
Date: Mon Feb 17 2014 - 06:51:36 CST


I just solved my problem. I did not need to use the wrap command. I
sequentially superimposed each segment (monomer 1, monomer 2, and DNA)
to its respective segment in frame 0. I used the fitframe script as

Thanks a lot.

On 02/17/2014 11:39 AM, Ariel Talavera Perez wrote:
> Yes Kenno, the bonds seems cross the whole after the wrapping.
> Aron, I followed your suggestion but it seems to increase the problem.
> One more question. Is always possible to solve that wrapping problem?
> Thanks again
> Ariel
> On 02/14/2014 08:25 PM, Aron Broom wrote:
>> pbc wrap -centersel "protein or nucleic" -center com -compound
>> residue -all

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