From: Sridhar Kumar Kannam (srisriphy_at_gmail.com)
Date: Sat Jan 25 2014 - 23:49:47 CST
The error means the number of atoms in your system pdb file and fixedatoms
pdb file is not the same.
Check your fixedatoms pdb fine and regenerate it carefully using your
system pdb.
If the problem still exist just send me your system pdb file and tell me
which atoms you want to fix.
Best,
On Sun, Jan 26, 2014 at 2:01 PM, Vidhya Sankar
<vidhyasankar7928_at_yahoo.com>wrote:
> dear Namd users I am doing Protein/mem simulation Whne i run the Namd I
> have got the Following error
> Though both .psf and .pdb contains equal number of atoms
> Beta column of both lipid and membrane have 0.00 only
>
> FATAL ERROR: Number of atoms in fixed atoms PDB doesn't match coordinate
> PDB
> ------------- Processor 0 Exiting: Called CmiAbort ------------
> Reason: FATAL ERROR: Number of atoms in fixed atoms PDB doesn't match
> coordinate PDB
>
> How to solve the error?
> Withe regards
> S>Vidhyasankar
>
-- Cheers !!! Sridhar Kumar Kannam :)
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