Drifting water molecules

From: Mihaela Drenscko (quo.physics_at_gmail.com)
Date: Wed Nov 27 2013 - 16:45:10 CST


When I run water on graphite simulation, my water bulk drifts towards next
cell, such that at the end of the simulation I have part of the water in
one cell and part in another.
I have to do an analysis of the trajectories and the program I use does not
read the part of the water molecules that are in the adjacent cell.
What can I do to keep all water molecules centered in one cell, such that
my program can read all trajectories?

Thank you,


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