Reg VDw Parameters

From: Vidhya Sankar (
Date: Fri Sep 27 2013 - 11:18:30 CDT

Dear Namd user            Thank you for your previous reply When i run the namd for my membrane protein using the following command ./charmrun  namd2 ++local p8 equlibation.conf I have go the following error  DIDN'T FIND vdW PARAMETER FOR ATOM TYPE OT Which  file Should i go and Edit ( i think the atom type tip water oxygen) i am using the  par_all38_lipid.prm and top_all36_lipid.rtf files Thanks in Advance

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