Re: BKS potential

From: Marzieh Alishahi (alishahi.mar_at_gmail.com)
Date: Sat Aug 03 2013 - 13:39:33 CDT

Dear Nadia,

I remember that I had the same problem with *SiOtab.par *file. Finally I
decided to write my own parameter file with same values as SiO2 bond values
instead of tutorial file.

Best,

Marzieh Alishahi

On Sat, Aug 3, 2013 at 10:24 PM, nadia salami <nadiasalamii_at_gmail.com>wrote:

> *Hi *
> * *
> * I want to build amorphous sio2 with BKS potential I have done it *
> *with tutorial of Modeling Nanopores for Sequencing DNA when I minimize
> the built *
> *sio before annealing, I encounter to this error : *
> *Expected 3 tabulated energy types but got 2*
> *could you please help me?*
>
> *Previously, Sheida Bagherzade had asked this and I saw in the mailing
> list of namd, but I haven't found any answers for this error.*
>
> *Thanks a lot. *
> * Best regards**.*
>

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