Topology and parameters for nitrate and nitrite ion

Date: Sat Jun 29 2013 - 12:51:39 CDT

Dear NAMD users,
I want to run a simulation of a protein with bound nitrite and nitrate ions. Can
someone please guide me on how/where to obtain the topology and parameter files
for these ions? Any suggestions will be highly appreciated.


सूक्ष्मजीव प्रौद्योगिकी संस्थान (वैज्ञानिक औद्योगिक अनुसंधान परिषद)
Institute of Microbial Technology (A CONSTITUENT ESTABLISHMENT OF CSIR)
सैक्टर 39 ए, चण्डीगढ़ / Sector 39-A, Chandigarh
पिन कोड/PIN CODE :160036
दूरभाष/EPABX :0172 6665 201-202

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