AW: NAMD related

From: Norman Geist (norman.geist_at_uni-greifswald.de)
Date: Mon Jun 10 2013 - 10:24:11 CDT

Hi,

 

you just seem to not have TCL installed, or not the directory containing it,
is not in your LD_LIBRARY_PATH. These are linux basics and not related to
namd. Why don't you use a precompiled version of namd?

 

Norman Geist.

 

Von: owner-namd-l_at_ks.uiuc.edu [mailto:owner-namd-l_at_ks.uiuc.edu] Im Auftrag
von Anilkumar Naik
Gesendet: Montag, 10. Juni 2013 13:35
An: Namd Mailing List
Betreff: namd-l: NAMD related

 

Dear All,

 

I am trying to run NAMD as non root user. So may be missing some path or
linking that causing below errors. Sorry for asking simple question.

 

Using charm as:

./build charm++ mpi-linux-ppc mpicxx -j8 --with-production

 

Using NAMD_2.9_Source as:

/config Linux-PPC-MX64-xlc64.arch --charm-base ./charm-6.4.0 --charm-arch
mpi-linux-ppc-mpicxx --arch-suffix ppc64

 

Attached NAMD make config, NAMD arch and PATH setting files.

 

Pl give some help to understand below errors. This is will very helpful for
us to start using NAMD on IBM Linux-Power 7 arch. Looking forward for some
reply.

 

=================

obj/tcl_psfgen.o:(.text+0x7814): undefined reference to `Tcl_NewStringObj'

obj/tcl_psfgen.o:(.text+0x7828): undefined reference to
`Tcl_ListObjAppendElement'

obj/tcl_psfgen.o:(.text+0x7894): undefined reference to `Tcl_AppendResult'

obj/tcl_psfgen.o:(.text+0x7920): undefined reference to `Tcl_Merge'

obj/tcl_psfgen.o:(.text+0x7938): undefined reference to `Tcl_Eval'

obj/tcl_psfgen.o:(.text+0x7944): undefined reference to `Tcl_Free'

obj/tcl_psfgen.o:(.text+0x7958): undefined reference to `Tcl_Merge'

obj/tcl_psfgen.o:(.text+0x7970): undefined reference to `Tcl_Eval'

obj/tcl_psfgen.o:(.text+0x797c): undefined reference to `Tcl_Free'

obj/tcl_psfgen.o:(.text+0x7a9c): undefined reference to `Tcl_SetResult'

obj/tcl_psfgen.o:(.text+0x7ae8): undefined reference to `Tcl_AppendResult'

obj/tcl_psfgen.o:(.text+0x7b1c): undefined reference to `Tcl_AppendResult'

obj/tcl_psfgen.o:(.text+0x80fc): undefined reference to `Tcl_NewIntObj'

obj/tcl_psfgen.o:(.text+0x810c): undefined reference to `Tcl_SetObjResult'

obj/tcl_psfgen.o:(.text+0x8150): undefined reference to `Tcl_AppendResult'

obj/tcl_psfgen.o:(.text+0x8178): undefined reference to `Tcl_AppendResult'

obj/tcl_psfgen.o:(.text+0x81b8): undefined reference to `Tcl_AppendResult'

gmake: *** [psfgen] Error 1

gmake: *** Waiting for unfinished jobs....

    1500-036: (I) The NOSTRICT option (default at OPT(3)) has the potential
to alter the semantics of a program. Please refer to documentation on the
STRICT/NOSTRICT option for more information.

    1500-036: (I) The NOSTRICT option (default at OPT(3)) has the potential
to alter the semantics of a program. Please refer to documentation on the
STRICT/NOSTRICT option for more information.

    1500-036: (I) The NOSTRICT option (default at OPT(3)) has the potential
to alter the semantics of a program. Please refer to documentation on the
STRICT/NOSTRICT option for more information.

    1500-036: (I) The NOSTRICT option (default at OPT(3)) has the potential
to alter the semantics of a program. Please refer to documentation on the
STRICT/NOSTRICT option for more information.

    1500-036: (I) The NOSTRICT option (default at OPT(3)) has the potential
to alter the semantics of a program. Please refer to documentation on the
STRICT/NOSTRICT option for more information.

    1500-036: (I) The NOSTRICT option (default at OPT(3)) has the potential
to alter the semantics of a program. Please refer to documentation on the
STRICT/NOSTRICT option for more information.

    1500-036: (I) The NOSTRICT option (default at OPT(3)) has the potential
to alter the semantics of a program. Please refer to documentation on the
STRICT/NOSTRICT option for more information.

    1500-036: (I) The NOSTRICT option (default at OPT(3)) has the potential
to alter the semantics of a program. Please refer to documentation on the
STRICT/NOSTRICT option for more information.

    1500-036: (I) The NOSTRICT option (default at OPT(3)) has the potential
to alter the semantics of a program. Please refer to documentation on the
STRICT/NOSTRICT option for more information.

    1500-036: (I) The NOSTRICT option (default at OPT(3)) has the potential
to alter the semantics of a program. Please refer to documentation on the
STRICT/NOSTRICT option for more information.

=================

 

Regards,

Anilkumar

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