Re: A larger protein data bank for performance benchmark

From: Ajasja Ljubetič (ajasja.ljubetic_at_gmail.com)
Date: Mon May 13 2013 - 12:13:46 CDT

Here is a ready to run benchmark (apo1)
http://www.ks.uiuc.edu/Research/namd/performance.html (Direct
download<http://www.ks.uiuc.edu/Research/namd/utilities/apoa1.tar.gz>
)

On 13 May 2013 18:52, Cesar Millan <pachequin_at_gmail.com> wrote:

> www.pdb.org
>
>
> On Mon, May 13, 2013 at 11:49 AM, linux freaker <linuxfreaker_at_gmail.com>wrote:
>
>> I installed namd on linux machine.I ran src/alanin on 4 processor and it
>> completed in no time.I need it to take some 5-10 minutes running so that I
>> can benchmark.where I can download pdb from which is larger in size?
>>
>
>

This archive was generated by hypermail 2.1.6 : Wed Dec 31 2014 - 23:21:11 CST