Any alternative to colvars for minimization?

From: Francesco Pietra (chiendarret_at_gmail.com)
Date: Thu Jun 06 2013 - 01:36:40 CDT

• Next message: Norman Geist: "AW: how to do a vacuum minimization without electrostatics and periodic boundary conditions?"
• Previous message: James Starlight: "Re: First meeting with NAMD"
• Next in thread: Norman Geist: "AW: Any alternative to colvars for minimization?"
• Reply: Norman Geist: "AW: Any alternative to colvars for minimization?"
• Reply: Giacomo Fiorin: "Re: Any alternative to colvars for minimization?"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]

Hello:
May I as whether there is an alternative to (non usable) colvars for
minimization with namd2.9/parm7? I would like to restrain dihedrals around
a transition metal in a protein. Once passed the minimization, I could use
colvars.

Thanks
francesco pietra

• Next message: Norman Geist: "AW: how to do a vacuum minimization without electrostatics and periodic boundary conditions?"
• Previous message: James Starlight: "Re: First meeting with NAMD"
• Next in thread: Norman Geist: "AW: Any alternative to colvars for minimization?"
• Reply: Norman Geist: "AW: Any alternative to colvars for minimization?"
• Reply: Giacomo Fiorin: "Re: Any alternative to colvars for minimization?"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]

This archive was generated by hypermail 2.1.6 : Tue Dec 31 2013 - 23:23:18 CST