Re: one-sided harmonic restraint potential

From: Giacomo Fiorin (giacomo.fiorin_at_gmail.com)
Date: Mon Jul 02 2012 - 21:59:42 CDT

Hello Sandeep, an upper boundary applied to a distanceZ collective variable
would seem best for your case.

Giacomo

On Mon, Jul 2, 2012 at 10:51 PM, Sandeep Patel <spatel_at_mail.chem.udel.edu>wrote:

> Dear User Mailing List
>
> Is there a one-sided harmonic restraint potential method in NAMD. I would
> like to prevent a protein from moving beyond a certain, specified distance
> from a bilayer interface.
>
> Thanks in advance,
> Sandeep
>
>
>

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