From: Brett T. Hannigan (brett_at_thehannigans.org)
Date: Fri Jun 22 2012 - 13:04:34 CDT
When using NAMD 2.8 CUDA, I could run on my local machine using multiple
cores by using charmrun.
*charmrun ++local +p3 namd2 +idlepoll simulation.conf*
However, when I downloaded NAMD 2.9 and tried the same thing, it dies
saying
"FATAL ERROR: Unknown command-line option ++local"
It looks like the charmrun included in the NAMD 2.9 CUDA is a simple script
as described for the MPI version, while the charmrun in the 2.8 CUDA
version I downloaded is an actual binary. Any suggestions on what the
proper thing to do here is?
For the time being, I downloaded the non-CUDA NAMD 2.9, which has a binary
version of charmrun, and I'm trying using that charmrun with the CUDA
namd2, but I'm not sure if it's proper to mix and match like that...
-- ****************************************** Brett T. Hannigan 8011 Ardleigh St. Philadelphia, PA 19118 brett.hannigan_at_gmail.com ******************************************
This archive was generated by hypermail 2.1.6 : Tue Dec 31 2013 - 23:22:10 CST