From: scott davis (scottcd13_at_gmail.com)
Date: Tue Jun 12 2012 - 16:49:55 CDT
Hello,
I have looked through the tutorial and the previous messages and found the
answers received a little hard to digest.
I am trying to figure out how to run a simulation in NAMD using amber force
field. I have read that different input files are needed then psf/pdb. I
understand that yet have not been able to find a gui or utility to feed the
psf/pdb into that will either make or allow me to make the files needed.
Also if anyone has a sample configuration file so I have something to work
off from. I am somewhat new to NAMD/ VMD and not very familiar with all of
the features.
Thank you,
Scott Davis
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