Re: Questions

From: Joshua Adelman (jla65_at_pitt.edu)
Date: Mon Oct 10 2011 - 21:54:49 CDT

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Hi Kevin,

On Oct 10, 2011, at 10:20 PM, Kevin Littrell wrote:

> Hello,
>
> I have a few questions about NAMD and dcd trajectory files:
>
> 1)
> if catdcd utility can give number of frames in dcd trajectory file?
>

I would take a look at the documentation:
http://www.ks.uiuc.edu/Development/MDTools/catdcd/

The answer is there if you look for it.

> 2)
> If you have any tips for finding out optimal parameters for NAMD energy calculation for a subsystems

I'm not sure what you're asking for here. Could you give a bit more detail about what you are trying to do?

Cheers,
Josh

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