From: Axel Kohlmeyer (akohlmey_at_gmail.com)
Date: Fri Sep 09 2011 - 10:44:42 CDT
On Fri, Sep 9, 2011 at 10:01 AM, Hasan haska <hasanhaska_at_yahoo.com> wrote:
> Dear NAMD users,
> I loaded my .psf and then loaded .pdb file into psf in VMD then used the
> command “ topo writegmxtop myfile.top” in tk console. I finally generated a
> .top file successfully. But how can I generate a gromacs tpr file using this
you are on the wrong mailing list for that. this kind of question you
should post to the gromacs users mailing list. thanks.
> .top file ? Can you please give me the information about generating tpr file
you need to use grompp. details are in the gromacs documentation.
please note the disclaimer, that this is a fake .top file that has limited
use, except for running (some) gromacs analysis tools.
> Thanks a lot for your help.
-- Dr. Axel Kohlmeyer akohlmey_at_gmail.com http://goo.gl/1wk0 Institute for Computational Molecular Science Temple University, Philadelphia PA, USA.
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