Re: Implicit solvent

From: David Tanner (guacamoleo_at_gmail.com)
Date: Mon Jun 27 2011 - 09:04:24 CDT

NAMD currently only supports OBC I and II.

~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
David E. Tanner
Theoretical and Computational Biophysics Group
3159 Beckman Institute
University of Illinois at Urbana-Champaign
405 N. Mathews
Urbana, IL 61801
http://www.linkedin.com/in/davidetanner
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

On Jun 27, 2011, at 6:35 AM, Massimiliano Porrini wrote:

Dear NaMD users and developers,

I would like to know if with NAMD it is somehow possible to implement
the implicit solvent
model derived by Hawkins, Cramer and Truhlar (Ref. 27 in the NAMD user
guide)
or the only available current models are the ones of Onufriev,
Bashford and Case (OBC I and II).

Many thanks in adavnce.

Regards,

-- 
Dr Massimiliano Porrini
Institute for Condensed Matter and Complex Systems
School of Physics & Astronomy
The University of Edinburgh
James Clerk Maxwell Building
The King's Buildings
Mayfield Road
Edinburgh EH9 3JZ
Tel +44-(0)131-650-5229
E-mails : M.Porrini_at_ed.ac.uk
              mozz76_at_gmail.com
              maxp_at_iesl.forth.gr

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