From: ipsita basu (ibasu788_at_gmail.com)
Date: Sat Mar 12 2011 - 04:33:39 CST
I have a system composed of lipid, protein and sugar. I am facing
the following error while running the system in namd:
Fatal error on PE 0> FATAL ERROR: Atom 129 has bad hydrogen group
size. Check for duplicate bonds.
I build the psf in xplor format using charmm. I used the same
procedure for psf before for other systems where the system contains
no sugar and found no problem.
Can you please help me to solve the problem. It'll be really helpful to me.
-- Ipsita Basu Research Fellow c/o : Dr. Chaitali Mukhopadhyay Rajabazar Science College 92 APC Road Kolkata - 700009
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