creating .psf file for a nanotube

From: sakthi kumaran (
Date: Fri Mar 11 2011 - 02:36:02 CST

Dear all,
          I have coordinates of a (5,5)nanotube in a .pdb file.To create a
.psf file the autopsf builder in vmd requires some topology file to be
included. I just need to have that required file as needed my autopsf
builder to have my psf file for my nanotube.

a small doubt that I am not getting cleared What makes a topology file
different from a parameter file?

thank you
Kind regards,

This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 15:56:44 CST