NBFIX and cuda

From: Jacopo Sgrignani (sgrigna_at_sissa.it)
Date: Wed Dec 22 2010 - 03:13:48 CST

Dear all
i would like to use amber topologies to run namd with cuda but i got
the error:
CUDA-accelerated NAMD does not support NBFIX terms in parameter file.

I found some messages in the list about the meaning of the NBFIX
terms, but i was not able to understand two questions:
  can i use the amber topologies ?
  how can i do it?

I did not find NBFIX terms in the prmtop file, so i'm a little bit confused.



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